Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015866483.1_cds_XP_016432687.1_28904
CDS Infomation

[gene=LOC107759316] [db_xref=GeneID:107759316] [protein=inositol-3-phosphate synthase-like] [protein_id=XP_016432687.1] [location=complement(join(5497..5616,6584..6646,6728..6916,7008..7184,7425..7540,7804..8030,8132..8379,8833..8968,9147..9215,9601..9788))] [gbkey=CDS]
Sequence

ATGTTCATAGAAAATTTTAAGGTTGAAAGCCCAAATGTGAAGTACACAGAAACTGAGATT
CACTCTTTGTATGATTATCAAACCACAGAGTTGGTTCATGAAGAGAAAAATGGCTCTTAT
CAATGGACTGTCAAGCCAAAAACTGTCAAATATGAGTTCAAAACTGATACCTGTGTTCCC
AAATTAGGGGTTATGCTTGTTGGATGGGGAGGAAACAACGGTTCAACTCTGACGGGAGGT
GTTATTGCTAATAAAGAAGGAATTTCATGGGCAACAAAAGAGAAGGCGCAACAAGCCAAT
TACTTTGGGTCTCTTACTCAGGCATCAACAATTAGAGTTGGATCTTTCAATGGAGAAGAG
ATCTATGCCCCTTTCAAGAGCCTCCTTCCCATGGTTAATCCGGATGATGTAGTGTTTGGA
GGATGGGACATTAGCAACATGAATTTGGCAGATGCTATGGTCAGGGCCAAGGTTTTCGAC
ATTGATCTGCAAAACCAGCTGAGGCCCTATATGGAATCCATGGTCCCTCTTCCCGGTATC
TATGATCCTGACTTCATTGCTGCTAACCAAGAATCACGCGCCAACAACGTGATCAAAGGA
ACCAAGAAAGAACAAGTTGATCAAATTGTTAAAGATATTAGGGAGTTCAAGGAAAAGAAT
AAGGTAGACAAGATTGTGGTGCTGTGGACTGCCAACACAGAAAGATACAGCAATGTGATT
GTTGGACTAAATGACACAATGGAAAATCTTTTGGCTGCTGTCGATAGAAATGAGGCTGAA
GTATCTCCTTCTACATTGTATGCTATTGCTTGTGTTCTTGAAAATGTACCTTTCATCAAT
GGAAGCCCACAAAACACTTTTGTACCAGGTCTTATTGATTTGGCCATAAAGAGGAACACT
TTGATTGGTGGTGATGACTTTAAGAGTGGTCAAACCAAGATGAAGTCAGTGCTGGTTGAT
TTCCTAGTTGGAGCTGGTATTAAGCCAACATCAATTGTGAGCTACAATCACTTGGGTAAT
AACGATGGAATGAATCTTTCTGCCCCTCAAACTTTCCGGTCTAAGGAGATCTCAAAAAGC
AATGTTGTCGATGACATGGTTTCCAGTAACGCCATTCTCTATGAAGCTGGCGAGCATCCT
GACCATGTTGTTGTGATCAAGTATGTTCCATATGTTGGAGATAGTAAGAGGGCAATGGAT
GAGTACACATCAGAGATTTTCATGGGTGGAAATAACACTATAGTTTTGCACAACACTTGT
GAGGATTCTCTTTTGGCTGCTCCAATTATATTGGACTTAGTCCTTCTCGCCGAACTCAGC
ACTCGCATTCAGCTCAAAGCTGAAGGAGAGGGGAAGTTCCACTCTTTCCATCCTGTTGCT
ACTATACTCAGCTACCTCACTAAGGCTCCTTTGGTACCACCAGGTACACCAGTGGTGAAT
GCTTTGTCAAAGCAAAGGGCAATGCTTGAGAACATATTGAGAGCTTGTGTTGGTTTGGCA
CCAGAAAACAACATGATTTTGGAATACAAATGA

Peptide Sequence

PEP ID

XP_016432687.1
PEP Infomation

PREDICTED: inositol-3-phosphate synthase-like [Nicotiana tabacum]
Sequence

MFIENFKVESPNVKYTETEIHSLYDYQTTELVHEEKNGSYQWTVKPKTVKYEFKTDTCVP
KLGVMLVGWGGNNGSTLTGGVIANKEGISWATKEKAQQANYFGSLTQASTIRVGSFNGEE
IYAPFKSLLPMVNPDDVVFGGWDISNMNLADAMVRAKVFDIDLQNQLRPYMESMVPLPGI
YDPDFIAANQESRANNVIKGTKKEQVDQIVKDIREFKEKNKVDKIVVLWTANTERYSNVI
VGLNDTMENLLAAVDRNEAEVSPSTLYAIACVLENVPFINGSPQNTFVPGLIDLAIKRNT
LIGGDDFKSGQTKMKSVLVDFLVGAGIKPTSIVSYNHLGNNDGMNLSAPQTFRSKEISKS
NVVDDMVSSNAILYEAGEHPDHVVVIKYVPYVGDSKRAMDEYTSEIFMGGNNTIVLHNTC
EDSLLAAPIILDLVLLAELSTRIQLKAEGEGKFHSFHPVATILSYLTKAPLVPPGTPVVN
ALSKQRAMLENILRACVGLAPENNMILEYK

Transcript Sequence

Gene sequence data has not been registered.